General: Normalize RuntimeCommon include paths

Performs the same normalizing done to the RuntimeCommonB target, now all
of the runtime headers have normalized include paths.

Runtime/MP1/CMainFlow.hpp

@@ -1,6 +1,6 @@
 #pragma once
 
-#include "CMainFlowBase.hpp"
+#include "Runtime/CMainFlowBase.hpp"
 
 namespace urde {
 class CArchitectureMessage;